Please input tab-delimited genomic alteration events.
The data should contain three tab-delimited columns.
The first row is a header row, which contains: Sample Gene Alteration Type.
Each following row contains a single genomic event in a single sample.
You can also list samples without any events at the end of the list so that the percentages can be properly calculated.
Note: Any row which has an entry in the Gene (2nd) column must also have an entry in the Alteration (3rd) and Type (4th) columns
Sample: Sample ID
Gene: Gene symbol (or other gene identifier)
Alteration: Definition of the alteration event
Mutation event: amino acid change or any other information about the mutation
Fusion event: fusion information
Copy number alteration (CNA) - please use one of the four events below:
AMP: high level amplification
GAIN: low level gain
HETLOSS: shallow deletion
HOMDEL: deep deletion
mRNA expression - please use one of the two events below:
UP: expression up
DOWN: expression down
Protein expression - please use one of the two events below:
PROT-UP: RPPA Upregulation
PROT-DOWN: RPPA Downregulation
Type: Definition of the alteration type. It has to be one of the following.
For a mutation event, please use one of the three mutation types below: